Researcher Raises Public Money to Sequence Genome of Small Fern With Massive Green Potential

Durham, NC (PressExposure) June 15, 2014 -- Scientists from Duke University are raising money through crowdfunding platform to sequence the genome of a promising little fern called Azolla. This could be a huge step towards decreasing Earth's CO2 levels, improving biofuel production, and lowering food prices.

Fifty million years ago, the Earth was so warm that turtles and alligators thrived in lush forests at the poles. Much of the North Pole was covered in a rather less charismatic life form: the floating, duckweed-like fern, Azolla.

Recent geological evidence from Arctic Ocean seabeds reveals 50-million-year-old sediments that are composed almost entirely of Azolla fossils for an 800,000-year span. This interval, known as the 'Arctic Azolla event,' was a period when Azolla blanketed the ocean surface repeatedly, forming dense mats of vegetation.

Then something really interesting happened. As these Azolla plants died and became part of the sediment, they took atmospheric carbon down with them. Global atmospheric levels of CO2 fell significantly, precipitating Earth's initial shift from a greenhouse world towards the current icehouse climate that we're now worried will melt.

Azolla is still with us, floating on the surface of ponds, lakes and rice paddies. Though tiny--one Azolla plant could comfortably sit on top of your smallest fingernail--it can double its entire body mass in just less than two days. Some researchers think this makes it a promising alternative for biofuel production and carbon-capture efforts.

But Azolla does yet another interesting trick--it captures all the nitrogen fertilizer it needs from the atmosphere around it. Since the dawn of agriculture, Asia's farmers have known about, and deliberately exploited, the benefits of growing Azolla as a companion plant with rice. The floating fern thrives in rice paddies, fixing nitrogen and other nutrients, which are released into the environment at the end of each growing season, constantly improving the soil composition and providing a natural, green fertilizer that significantly bolsters rice productivity.

The secret here is that Azolla isn't just a plant; it's a 'superorganism,' a symbiotic collaboration of a plant and a microbe. In a special protective cavity inside each leaf, Azolla hosts a microbe called Nostoc that spends its entire life converting atmospheric nitrogen into food for its host.

Azolla and Nostoc have clearly demonstrated a prodigious ability to combat global warming, and to produce precious nitrogen that could help feed the world in a more sustainable way. Even though they have been co-evolving for nearly 100 million years, we­­ know very little about them and how they communicate. Wouldn't it be great to understand this symbiotic relationship better, and to be able to understand the biological "conversation" between the host and the microbe?.

Because it is classified as a "lowly fern," Azolla has been sidelined in plant genome studies. Repeated appeals to granting agencies for funding to unlock the know-how embodied by this superorganism have been met with responses like "too unconventional," or "too risky."

But to sustainably produce food for a world population of more than 7 billion people--all while reducing pollution and greenhouse gases--we will need to do some "risky" research. Novel ideas and innovative approaches that could reveal just how nature 'does what it does' naturally might help to revolutionize current farming practices. The cost of continuing to do the same old, same old makes little economic sense.

Specifically, we need a more sustainable source of nitrogen. By 2015, roughly 200 million tons of industrially produced, nitrogen-rich fertilizer will be needed to grow the world's food, a process that will consume vast amounts of fossil fuel, exacerbating our CO2 problems.

I think Azolla and Nostoc have great potential to reduce the world's reliance on fossil fuels, while scrubbing a bunch of CO2 out of the atmosphere in the bargain.

We're not talking about a lot of money to do this. Genomic sequencing of this unique Azolla-Nostoc system would cost well under $1 million. That's far less than the $8 billion each year that U.S. farmers pay for nitrogen fertilizer--much of which finds its way into rivers and streams, damaging delicate water systems. This small step toward potentially helping crops to use less synthetic nitrogen could benefit farmers' bottom lines, the environment, and the prices we pay for food.

I'd like to see the genome of the Azolla superorganism sequenced so that we can understand the language that codes for the molecular machinery underlying this symbiotic partnership, and possibly tailor it to suit our needs. Knowing how this works might even enable us to engineer crops to fix their own nitrogen--an achievement that could truly revolutionize modern agriculture.

Not often does such a small price promise a big gain -

Kathleen Pryer is a Professor of Biology at Duke University. She is also President of the American Fern Society and Past-President of the American Society for Plant Taxonomists.

For More Information: Dr. Kathleen Pryer, Duke University, 919-660-7380,

About Duke University

Kathleen Pryer is a Professor of Biology at Duke University. She is also President of the American Fern Society and Past-President of the American Society for Plant Taxonomists.

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Press Release Submitted On: June 15, 2014 at 1:57 am
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